2012
62. Dutta, S.; Flottmann, B.; Heilemann, M. & Mokhir, A. (2012) Hybridization and reaction-based, fluorogenic nucleic acid probes. Accepted by Chemical Communications
61. Malkusch, S.; Muranyi, W.; Müller, B.; Kräusslich, H.-G. & Heilemann, M.#(2012) Single-molecule, coordinate-based analysis of the morphology of HIV assembly sites with near-molecular spatial resolution. Accepted by Histochemistry and Cell Biology
60. Neugart, F.; Widera, D.; Kaltschmidt, B.; Kaltschmidt, C. & Heilemann, M.#(2012) TNF receptor membrane dynamics studied with fluorescence microscopy and spectroscopy. Accepted by Springer Series on Fluorescence: Properties and Functions of Biological Membranes Investigated by Fluorescence Methods
59. Heidbreder, M.; Zander, C.; Malkusch, S.; Widera, D.; Kaltschmidt, B.; Kaltschmidt, C.; Nair, D.; Choquet, D.; Sibarita, J.-B. & Heilemann, M. # (2012) TNFalpha influences the lateral dynamics of TNF receptor I in living cells. Accepted by BBA – Molecular Cell Research
58. Lando, D.; Endesfelder, U.; Berger, H.; Dunne, P. D.; McColl, J.; Klenerman, D.; Carr, A. M.; Sauer, M.; Allshire, R.; Heilemann, M. # & Laue, E. D. (2012) Quantitative single molecule microscopy reveals that CENP-Acnp1 deposition occurs during G2 in fission yeast. Open Biology, 2:120078.
57. Bar-on, D.; Wolter, S.; van de Linde, S.; Heilemann, M.; Nachliel, E.; Gutman, M.; Sauer, M. & Ashery, U. (2012) Super-resolution imaging reveals the internal architecture of nano-sized syntaxin clusters. Accepted by Journal of Biological Chemistry
56. Finan, K.; Flottmann, B. & Heilemann, M. # (2012) Photoswitchable fluorophores for single-molecule loclization microscopy. Methods in Molecular Biology, 950, pp.
55. Nangunieri, S.; Flottmann, B.; Horstmann, H.; Heilemann, M. # & Kuner, T. (2012) Three-dimensional, tomographic super-resolution fluorescence imaging of serially sectioned thick samples. Accepted by Plos ONE, 7, e38098.
54. Brodehl, A.; Hedde, P. N.; Dieding, M.; Fatima, A.; Walhorn, V.; Gayda, S.; Saric, T.; Klauke, B.; Gummert, J.; Anselmetti, D.; Heilemann, M.; Nienhaus, G. U. & Milting, H. (2012) Molecular insights into filament assembly defects of ARVC-related desmin mutations. Journal of Biological Chemistry, 287, 16047-16057.
53. Lampe, A.; Haucke, V.; Heilemann, M. & Schmoranzer, J. (2012) Multi-color direct STORM with red emitting carbocyanines. Biology of the Cell, 104, 229-237.
52. van de Linde, S.; Heilemann, M. & Sauer, M. (2012) Live-cell super-resolution imaging with synthetic fluorophors. Accepted for publication by Annual Reviews of Physical Chemistry, 63, 519-540.
51. Löschberger, A.; van de Linde, S.; Dabauvalle, M.-C.; Rieger, B.; Heilemann, M.; Krohne, G. & Sauer, M. (2012) Super-resolution imaging reveals eightfold symmetry of gp210 proteins around the nuclear pore complex and resolves the central channel with nanometer resolution. J Cell Science, 125, 570-575.
50. Heilemann, M.# (2012) Elucidating Cellular Structures – Superresolution Microscopy. Comprehensive Biophysics, Elsevier.
49. Zessin, P. J. M.; Finan, K. & Heilemann, M. # (2012) Super-resolution fluorescence imaging of chromosomal DNA using click chemistry. Journal of Structural Biology, 177, 344-348.
48. Dertinger, T..; Colyer, R.; Vogel, R.; Heilemann, M.; Sauer, M.; Enderlein, J. & Weiss, S.. (2012) Super-resolution optical fluctuation imaging (SOFI). Advances in Experimental Medicine and Biology, 733, 17-21.
47. Malkusch, S.; Endesfelder, U.; Mondry, J.; Gelléri, Martón; Verveer, P. J. & Heilemann, M. # (2012) Coordinate-based colocalization analysis of single-molecule localization microscopy data. Histochem Cell Biology, 137, 1-10.
2011
46. Eckhardt, M.; Anders, M.; Muranyi, W.; Heilemann, M.; Krijnse-Locker, J. & Müller, B. (2011) A SNAP-Tagged Derivative of HIV-1 – a Versatile Tool to Study Virus-Cell Interactions. PlosONE, 6(7), e22007.
45. van de Linde, S.; Löschberger, A.; Klein, T.; Heidbreder, M.; Wolter, S.; Heilemann, M. & Sauer, M. (2011) Direct stochastic optical reconstruction microscopy with standard fluorescent probes. Nature Protocols, 6(7), 991-1009.
44. Widera, D.; Heimann, P.; Zander, C.; Imielski, Y.; Heidbreder, M.; Heilemann, M.; Kaltschmidt, C. & Kaltschmidt, B. (2011) Myalinating Schwann Cells can be reprogrammed to multipotency by culture. Stem Cells and Development, 20(12), 2053-2064.
43. Endesfelder, U.; Malkusch, S.; Flottmann, B.; Mondry, J.; Liguzinski, P.; Verveer, P. J. & Heilemann, M.# (2011) Chemically induced photoswitching of fluorescent probes – a general concept for super-resolution imaging. Molecules, 16, 3106-3118.
42. Wolter, S.; Endesfelder, U.; van de Linde, S.; Heilemann, M. & Sauer, M. (2011) Measuring localization performance of super-resolution algorithms on very active samples. Accepted for publication by Optics Express
41. van de Linde, S.; Krstic, I.; Prisner, T.; Doose, S.; Heilemann, M. & Sauer, M. (2011) Photoinduced formation of stable dye radicals. Photochemical & Photobiological Sciences, 10, 499-506.
2010
40. Kottke, T.; van de Linde, S.; Sauer, M.; Kakorin, S. & Heilemann, M.# (2010) Identification of the Product of Photoswitching of an Oxazine Fluorophore Using Fourier Transform Infrared Difference Spectroscopy. Physical Chemistry Letters, 1, 3156-3159.
39. Dertinger, T.; Heilemann, M.#; Vogel, R.; Sauer, M. & Weiss, S. (2010) Superresolution Optical Fluctuation Imaging with Organic Dyes. Angewandte Chemie, 49, 9441-9443.
38. Zheng, Z.; Nottbohm, C. T.; Turchanin, A.; Muzik, H.; Beyer, A.; Heilemann, M.; Sauer, M.; Gölzhäuser, M. (2010) Janus nanomembranes: bilaterally functionalized freestanding 1 nm thick carbon membranes. Angewandte Chemie, 49, 8493-8497.
37. Wombacher, R.; Heidbreder, M.; van de Linde, S.; Sheetz, M. P.; Heilemann, M.#; Cornish, V. W. & Sauer, M. (2010) Live-cell super-resolution imaging of core histones with trimethoprim conjugates. Nature Methods, 7, 717-719.
36. Uphoff, S.; Holden, S.; Le Reste, L.; van de Linde, S.; Heilemann, M. & Kapanidis, A. N. (2010) Monitoring multiple distances within a single molecule using switchable FRET. Nature Methods, 7, 831-836.
35. Heidbreder, M.; Endesfelder, U.; van de Linde, S.; Hennig, S.; Widera, D.; Kaltschmidt, B.; Kaltschmidt C. & Heilemann, M.# (2010) Subdiffraction Fluorescence Microscopy of Biomolecular Structure and Distributions with Quantum Dot Triexciton Imaging (QDTI). Biochimica et Biophysica Acta, 1803, 1224-1229.
34. Hohlbein, J.; Gryte, K.; Heilemann, M. & Kapanidis, A. N. (2010) Surfing on a new wave of single-molecule fluorescence methods. Physics and Biology, 7, 031001.
33. Heilemann, M.# (2010) Fluorescence microscopy beyond the diffraction limit. Journal of Biotechnology, 149, 243-251.
32. van de Linde, S.; Wolter, S.; Heilemann, M.# & Sauer, M. (2010) The effect of photoswitching kinetics and labeling densities on super-resolution fluorescence imaging. Journal of Biotechnology, 149, 260-266.
31. Nottbohm, C. T.; Sopher, R.; Heilemann, M.; Sauer, M. & Golzhäuser A. (2010) Fluorescently labeled 1 nm thin carbon nanomembranes. Journal of Biotechnology, 149, 267-271.
30. Endesfelder, U.; van de Linde, S.; Wolter, S.; Sauer, M & Heilemann, M.# (2010) Subdiffraction-Resolution Fluorescence Microscopy of Myosin-Actin Motility. ChemPhysChem, 11, 836-840.
29. Seefeldt, B; Kasper, R.; Beining, M.; Mattay, J.; Arden-Jacob, J.; Kemnitzer, N.; Drexhage, K. H.; Heilemann, M. & Sauer, M. (2010) Spiropyrans as molecular optical switches. Photochemical & Photobiological Sciences, 9, 213-220.
28. Lymperopoulos, K.; Crawford, R.; Torella, J. P.; Heilemann, M.; Hwang, L. C.; Holden, S. J. and Kapanidis, A. N. (2010) Single-molecule DNA biosensors for protein and ligand detection. Angewandte Chemie, 49, 1316-1320.
27. Wolter, S.; Schüttpelz, M.; Tscherepanow, M.; van de Linde, S.; Heilemann, M. & Sauer, M. (2010) Real-time computation for subdiffraction-resolution fluorescence images. Journal of Microscopy, 237(1), 12-22.
2009
26. Heilemann, M.#; van de Linde, S.; Mukherjee, A. & Sauer, M. (2009) Super-resolution imaging with small organic fluorophores. Angewandte Chemie, 48, 6903-8.
25. Heilemann, M. & Sauer, M. (2009) Superhochauflösung: Mikroskopie unterhalb des Beugungslimits mit konventionellen Fluoreszenzfarbstoffen. Labor & more, 04-09, 32-34.
24. Hennig, S.; van de Linde, S.; Heilemann, M. # & Sauer, M. (2009) Quantum dot triexciton imaging with three-dimensional subdiffraction resolution. Nanoletters, 9, 2466-70.
(highlighted in Nature Materials, 8, 536 (2009))
23. Heilemann, M.# (2009) Light at the End of the Tunnel. Angewandte Chemie, 48, 3908-10.
22. Heilemann, M.; Lymperopoulos, K.; Hwang, L. C. & Kapanidis, A. (2009) Single-Molecule FRET-Analysis of protein-DNA complexes. Methods in Molecular Biology, 543, 503-521.
21. van de Linde, S.; Endesfelder, U.; Mukherjee, A.; Schüttpelz, M.; Wiebusch, G.; Wolter, S.; Heilemann, M.# & Sauer, M. (2009) Multicolor Photoswitching Microscopy for Subdiffraction Resolution Fluorescence Imaging. Photochemical and Photobiological Sciences, 8, 465-469.
20. Heilemann, M.#; Dedecker, P.; Hofkens, J. & Sauer, M. (2009) Photoswitches: Key Molecules for Subdiffraction-Resolution Fluorescence Imaging and Molecular Quantification. Laser and Photonics Reviews, 3, 180-202.
2008
19. van de Linde, S.; Kasper, R.; Heilemann, M. # & Sauer, M. (2008) Photoswitching Microscopy with Standard Fluorophores. Applied Phys. B, 93, 725-731.
18. van de Linde, S.; Sauer, M. & Heilemann, M.# (2008) Subdiffraction-Resolution Fluorescence Imaging of Proteins in the Mitochondrial Inner Membrane with Photoswitchable Fluorophores. Journal of Structural Biology, 164, 250-254.
17. Heilemann, M.#; van de Linde, S.; Schüttpelz, M.; Kasper, R.; Seefeldt, B.; Mukherjee, A.; Tinnefeld, P. & Sauer, M. (2008) Subdiffraction-Resolution Fluorescence Imaging with Conventional Fluorescent Probes. Angew. Chemie, 47, 6172-6176.
16. Goodman, R. P.; Heilemann, M.; Doose, S.; Kapanidis, A. N. & Turberfield, A. J. (2008) Reconfigurable, Braced, Three-Dimensional DNA Nanostructures. Nature Nanotechnology 3, 93-96.
15. Seefeldt, B.; Kasper, R.; Seidel, T.; Tinnefeld, P.; Dietz, K.-J.; Heilemann, M.# & Sauer, M. (2008) Fluorescent Proteins for Single-Molecule Fluorescence Applications. Journal of Biophotonics 1, 74-82.
14. Vogelsang, J.; Kasper, R.; Steinhauer, C.; Person, B.; Heilemann, M.; Sauer, M. & Tinnefeld, P. (2008). A reducing and oxidizing system minimizes photobleaching and blinking of fluorescent dyes. Angew. Chemie 47, 5465-5469.
2007
13. Roth, C. M., Heinlein, P. I., Heilemann, M.# & Herten, D. P. (2007). Imaging diffusion in living cells using time-correlated single-photon counting. Anal Chem 79, 7340-5.
12. Doose, S., Heilemann, M., Michalet, X., Weiss, S. & Kapanidis, A. N. (2007). Periodic acceptor excitation spectroscopy of single molecules. Eur Biophys J 36, 669-74.
11. Clifford, J. N., Bell, T. D., Tinnefeld, P., Heilemann, M., Melnikov, S. M., Hotta, J., Sliwa, M., Dedecker, P., Sauer, M., Hofkens, J. & Yeow, E. K. (2007). Fluorescence of single molecules in polymer films: sensitivity of blinking to local environment. J Phys Chem B 111, 6987-91.
2006
10. Sanchez-Mosteiro, G., van Dijk, E. M., Hernando, J., Heilemann, M., Tinnefeld, P., Sauer, M., Koberling, F., Patting, M., Wahl, M., Erdmann, R., van Hulst, N. F. & Garcia-Parajo, M. F. (2006). DNA-based molecular wires: multiple emission pathways of individual constructs. J Phys Chem B 110, 26349-53.
9. Heilemann, M., Kasper, R., Tinnefeld, P. & Sauer, M. (2006). Dissecting and reducing the heterogeneity of excited-state energy transport in DNA-based photonic wires. J Am Chem Soc 128, 16864-75.
2005
8. Tinnefeld, P., Heilemann, M. & Sauer, M. (2005). Design of molecular photonic wires based on multistep electronic excitation transfer. Chemphyschem 6, 217-22.
7. Heinlein, T., Biebricher, A., Schlüter, P., Roth, C. M., Herten, D. P., Wolfrum, J., Heilemann, M., Muller, C., Tinnefeld, P. & Sauer, M. (2005). High-resolution colocalization of single molecules within the resolution gap of far-field microscopy. Chemphyschem 6, 949-55.
6. Heilemann, M., Margeat, E., Kasper, R., Sauer, M. & Tinnefeld, P. (2005). Carbocyanine dyes as efficient reversible single-molecule optical switch. J Am Chem Soc 127, 3801-6.
2004 and before
5. Tinnefeld, P., Buschmann, V., Weston, K. D., Biebricher, A., Herten, D. P., Piestert, O., Heinlein, T., Heilemann, M.& Sauer, M. (2004). How single molecule photophysical studies complement ensemble methods for a better understanding of chromophores and chromophore interactions. Recent Res. Devel. Phys. Chem. 7, 95-125.
4. Herten, D. P., Biebricher, A., Heilemann, M., Heinlein, T., Müller, C., Schlüter, P., Tinnefeld, P., Weston, K. D., Sauer, M. & Wolfrum, J. (2004). Optical single molecule techniques for analytical and biological applications. Recent Res. Devel. Applied Phys. 7, 2-24.
3. Heilemann, M., Tinnefeld, P., Sanchez Mosteiro, G., Garcia Parajo, M., Van Hulst, N. F. & Sauer, M. (2004). Multistep energy transfer in single molecular photonic wires. J Am Chem Soc 126, 6514-5.
(highlighted in Science, 304, 5675 (2004))
2. Devos, I., Womes, M., Heilemann, M., Olivier-Fourcade, J., Jumas, J.-C. & Tirado, J. L. (2004). Lithium insertion mechanism in CoSb3 analysed by 121Sb Moessbauer spectrometry, X-ray absorption spectroscopy and electronic structure calculations. J. Mat. Chem. 14, 1759-67.
1. Heilemann, M., Herten, D. P., Heintzmann, R., Cremer, C., Muller, C., Tinnefeld, P., Weston, K. D., Wolfrum, J. & Sauer, M. (2002). High-resolution colocalization of single dye molecules by fluorescence lifetime imaging microscopy. Anal Chem 74, 3511-7.
