Publikationsliste:

(1) S. E. Biali, V. Böhmer, J. Brenn, M. Frings, I. Thondorf, W. Vogt and J. Wöhnert. Conformation, inversion barrier, and solvent-induced conformational shift in Exo- and Endo/Exo-Calix[4]arenes. J. Org. Chem. 1997, 62: 8350-8360.

(2) J. Wöhnert, J. Brenn, M. Stoldt, O. Aleksiuk, F. Grynszpan, I. Thondorf and S. E. Biali. Conformation and stereodynamics of Monodioxamethylene Calix[4]arene derivatives. J. Org. Chem. 1998, 63: 3866-3874.

(3) M. Stoldt*, J. Wöhnert*, M. Görlach and L. R. Brown. The NMR structure of Escherichia coli ribosomal protein L25 shows homology to general stress proteins and glutaminyl-tRNA synthetases. EMBO J. 1998, 17: 6377-6384.

(4) J. Wöhnert, R. Ramachandran, M. Görlach and L. R. Brown. Triple-resonance experiments for correlation of H5 and exchangeable pyrimidine base hydrogens in ¹³C,¹⁵N labelled RNA. J. Magn. Reson. 1999, 139: 430-433.

(5) J. Wöhnert, A.J. Dingley, M. Stoldt, M. Görlach, S. Grzesiek and L. R. Brown. Direct identification of NH···N hydrogen bonds in non-canonical base pairs of RNA by NMR spectroscopy. Nucl. Acids Res. 1999, 27: 3104-3110.

(6) M. Stoldt*, J. Wöhnert*, O. Ohlenschläger, M. Görlach and L. R. Brown. The NMR structure of the 5S rRNA E-domain–protein L25 complex shows preformed and induced recognition. EMBO J. 1999, 18: 6508-6521.    (* M. S. und J. W. contributed equally)

(7) F. Mueller, I. Sommer, P. Baranov, R. Matadeen, M. Stoldt, J. Wöhnert, M. Görlach, M. van Heel and R. Brimacombe. The 3D arrangement of the 23S and 5S rRNA in the Escherichia coli 50S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 Å resolution. J. Mol. Biol. 2000, 298: 35-59.

(8) K. Agbaria, J. Wöhnert and S. E. Biali. Extraannular fluorinated calixarenes: regiospecificity of the deoxofluorination reactions of bis(spirodienol) derivatives. J. Org. Chem. 2001, 66: 7059-7066.

(9) C. K. Smith, J. Wöhnert, R. T. Sauer and H. Schwalbe. Assignments of the ¹H, ¹³C, and ¹⁵N resonances of the substrate-binding SSD domain from Lon protease. J. Biomol. NMR 2001, 21: 387-388.

(10) B. Schlott, J. Wöhnert, C. Icke, M. Hartmann, R. Ramachandran, K. Gührs, E. Glusa, J. Flemming, M. Görlach, F. Große and O. Ohlenschläger. Interaction of Kazal-type inhibitor domains with serine proteinases: Biochemical and structural studies. J. Mol. Biol. 2002, 318: 533-546.

(11) S. Ilin, A. Hoskins, H. Schwalbe and J. Wöhnert^§. NMR assignments and secondary structure identification of the ribosomal protein L11 from Thermotoga maritima. J. Biomol. NMR 2003, 25: 163-164.

(12) J. Wöhnert^§, M. Görlach and H. Schwalbe. HCCNH-TOCSY-experiments for the simultaneous correlation of exchangeable and H6/H5 base proton resonances in pyrimidines. J. Biomol. NMR 2003, 26: 79-83.

(14) B. Fürtig, C. Richter, J. Wöhnert and H. Schwalbe. NMR spectroscopy of RNA.
ChemBioChem 2003, 4:936-962. Review.

(15) J. Wöhnert, K. J. Franz, M. Nitz, B. Imperiali and H. Schwalbe. Protein alignment by a coexpressed lanthanide binding tag for the measurement of residual dipolar couplings. J. Am. Chem. Soc. 2003, 125:13338-13339.

(16) O. Ohlenschläger*, J. Wöhnert*, E. Bucci, S. Seitz, S. Häfner, R. Ramachandran, R. Zell and M. Görlach. The structure of the stemloop D subdomain of Coxsackievirus B3 cloverleaf RNA and its interaction with the proteinase 3C. Structure 2004 , 12:237-248. (* O. O. und J. W. contributed equally)

(17) E. Duchardt, C. Richter, O. Ohlenschläger, M. Görlach, J. Wöhnert and H. Schwalbe. Determination of the glycosidic bond angle c in RNA from cross-correlated relaxation of CH dipolar coupling and N chemical shift anisotropy. J. Am. Chem. Soc. 2004, 126:1962-1970.

(18) S. Grimm and J. Wöhnert^§. Chemical shift assignments of the ribosome binding factor A – a cold shock protein from Thermotoga maritima. J. biomol. NMR 2005, 31:73-74.

(19) J. Noeske, C. Richter, M. A. Grundl, H. R. Nasiri, H. Schwalbe and J. Wöhnert^§. An intermolecular base triple as the basis of ligand specificity and affinity in the guanine and adenine sensing riboswitch RNAs. Proc. Natl. Acad. Sci. USA 2005, 102:1372-1377.

(20) S. Ilin, A. Hoskins, O. Ohlenschläger, H. Schwalbe and J. Wöhnert^§. Domain reorientation and induced fit upon RNA binding: solution structure and dynamics of ribosomal protein L11 from Thermotoga maritima. ChemBioChem 2005, 6:1611-1618.

(21) H. R. Nasiri, H. Schwalbe, M. Bolte and J. Wöhnert. N-9,N-7-Dimethyl-hypoxanthiniumiodide. Acta Crystallogr. E - Structure reports online 2005, 61: O3353-O3354.

(22) J. Noeske, C. Richter, E. Stirnal, H. Schwalbe and J. Wöhnert^§. Phosphate group recognition by the aptamer domain of the thiamine pyrophosphate sensing riboswitch. ChemBioChem 2006, 7: 1451-1456.

(23) E. Ab,  A. R. Atkinson, L. Banci, I. Bertini, ...., J. Wöhnert, M. Zweckstetter and R. Kaptein. NMR in the SPINE structural proteomics project. Acta Crystallogr. D 2006, 62: 1150-1161.

(24) J. Noeske, J. Buck, H. R. Nasiri, B. Fürtig, H. Schwalbe and J. Wöhnert^§. Interplay of ‘induced fit’ and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch. Nucleic Acids Res. 2007, 35:572-583.

(25) H. Jonker, S. Ilin, S. Grimm, J. Wöhnert^§ and H. Schwalbe. L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy. Nucleic Acids Res. 2007, 35:441-454.

(26) H. Schwalbe, J. Buck, B. Fürtig, J. Noeske and J. Wöhnert. Structures of RNA switches: insight into molecular recognition and tertiary structure. Angew. Chem. Int. Ed. Engl. 2007, 46: 1212-1219. Review.

(27) L. J. Martin, M. Hähnke, M. Nitz., J. Wöhnert, N. R. Silvaggi, K. N. Allen, H. Schwalbe and B. Imperiali. Double-lanthanide-binding tags: design, photophysical properties, and NMR applications. J. Am. Chem. Soc. 2007, 129: 7106-7113.

(28) J. Noeske, H. Schwalbe and J. Wöhnert^§. Metal-ion binding and metal-ion induced folding of the adenine-sensing riboswitch aptamer domain. Nucleic Acids Res. 2007, 35: 5262-5273.

(29) J. Buck, B. Fürtig, J. Noeske, J. Wöhnert and H. Schwalbe. Time-resolved NMR methods resolving ligand-induced RNA folding at atomic resolution. Proc. Natl. Acad. Sci. USA 2007, 104: 15699-15705.

(30) A. B. Taylor, B. Meyer, B. Z. Leal, V. Schirf, B. Demeler, P. Koetter, P. J. Hart, K.-D. Entian and J. Wöhnert^§. The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a preorganized SAM binding site. Nucleic Acids Res. 2008, 36: 1542-1554.

(31) J. Ferner, A. Villa, E. Duchardt, E. Widjajakusuma, J. Wöhnert, G. Stock and H. Schwalbe. NMR and MD-studies of the temperature dependent dynamics of RNA YNMG-tetraloops. Nucleic Acids Res. 2008, 36: 1928-1940..

(32) S. Cuzic, K. Abarca Heidemann, J. Wöhnert and R. Hartmann. Evidence for a rearrangement in Escherichia coli RNase P RNA-substrate complexes before cleavage chemistry. J. Mol. Biol. 2008, 379: 1-8.

(33) J. Ferner, M. Suhartono, S. Breitung, H. R. Jonker, M. Hennig, J. Wöhnert, M. Göbel, H. Schwalbe. Structures of HIV TAR RNA-ligand complexes reveal higher binding stoichiometries. ChemBiochem 2009, 10: 1490-1494.

(34) A. Villa, J. Wöhnert^§, G. Stock. Molecular dynamics simulation study of the binding of purine bases to the aptamer domain of the guanine sensing riboswitch. Nucleic Acids Res. 2009, 37: 4774-4786.

(35) J. P. Wurm, E. Duchardt, B. Meyer, B. Z. Leal, P. Kötter, K. D. Entian, J. Wöhnert^§. Backbone resonance assignments of the 48 kDa dimeric putative 18S rRNA-methyltransferase Nep1 from Methanocaldococcus jannaschii. Biomol. NMR Assign. 2009, 3: 251-254.

(36) J. P. Wurm, B. Meyer, U. Bahr, M. Held, O. Frolow, P. Kötter, J. W. Engels, A. Heckel, M. Karas, K. D. Entian, J. Wöhnert^§. The ribosome assembly factor Nep1 responsible for Bowen-Conradi syndrome is a pseudouridine-N1-specific methyltransferase. Nucleic Acids Res. 2010, 38: 2387-2398. (selected as "Featured Article")

(37) S. R. Schmidtke, E. Duchardt-Ferner, J. E. Weigand, B. Suess, J. Wöhnert^§. NMR resonance assignments of an engineered neomycin-sensing riboswitch RNA bound to ribostamycin and tobramycin. Biomol. NMR Assign. 2010, 4;115-118.

(38) J. Buck, J. Noeske, J. Wöhnert, H. Schwalbe. Dissecting the influence of Mg2+ on 3D architecture and ligand-binding of the guanine-sensing riboswitch aptamer domain. Nucleic Acids Res. 2010, 38: 4143-4153.

(39) E. Duchardt-Ferner, J. E. Weigand, S. R. Schmidtke, O. Ohlenschläger, B. Suess, J. Wöhnert§. Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch. Angew. Chem. Int. Ed. Engl. 2010, 49:6216-6219.

(40) B. Meyer, J. P. Wurm, P. Kötter, M. S. Leisegang, V. Schilling, M. Buchhaupt, M. Held, U. Bahr, M. Karas, A. Heckel, M. T. Bohnsack, J. Wöhnert, K.-D. Entian. The Bowen-Conradi syndrome protein Nep1 (Emg1) has a dual role in eukaryotic ribosome biogenesis, as an essential assembly factor and in the methylation of Psi1191 in yeast 18S rRNA. Nucleic Acids Res. 2010, in press.

(41) J. E. Weigand, S. R. Schmidtke, T. J. Will, E. Duchardt-Ferner, C. Hammann, J. Wöhnert, B. Suess. Mechanistic insights into an engineered riboswitch: A switching element which confers riboswitch activity. Nucleic Acids Res. 2010, in press.

(^§) corresponding author

geändert am 19. Oktober 2010  E-Mail: Webmasterm.fauth@bio.uni-frankfurt.de